BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035C04LP1|AL430019
(948 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1538 1816 0.0
>3x_Contig1538
Length = 9120
Score = 1816 bits (916), Expect = 0.0
Identities = 940/948 (99%)
Strand = Plus / Plus
Query: 1 gatcaggagaagaagccgaagaagcattctaagaaggagaagaaatccaaagaaaagaag 60
|||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct: 975 gatcaggagaagaagccgaagaagcattcttagaaggagaagaaatccttagtaaagaag 1034
Query: 61 aagaccagtaagaagggcgataaggagaaagaaaagtctaagaagaaagagaaaaagtcc 120
||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct: 1035 aagaccagtaagaagggcgataaaaaaaaagtaaagtctaagaagaaagagaaaaagtcc 1094
Query: 121 aaagaaaaaaagagctctagcaataatgatgtgctcaattttgaagatgttattaagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 aaagaaaaaaagagctctagcaataatgatgtgctcaattttgaagatgttattaagggc 1154
Query: 181 ttcatggaacagaccgaagctgcaccagcggtagctagccaggtggaaccaaatgctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 ttcatggaacagaccgaagctgcaccagcggtagctagccaggtggaaccaaatgctcct 1214
Query: 241 atcggtgatgctgaaactcaggcattagtggaagcaacattgaaagcgtttgaaaatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 atcggtgatgctgaaactcaggcattagtggaagcaacattgaaagcgtttgaaaatcag 1274
Query: 301 ttaatcggtggcccttcaactgccaagcccaaaacaagttcaaccagaaaaccacccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 ttaatcggtggcccttcaactgccaagcccaaaacaagttcaaccagaaaaccacccaaa 1334
Query: 361 actacaagccacaagttttcgaagtctttaccacctccacttccgatgccgttctttcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 actacaagccacaagttttcgaagtctttaccacctccacttccgatgccgttctttcca 1394
Query: 421 atcactcagaagcgtaaggtaaaatctaaatctacggaaaaagctaaagaaggccaggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 atcactcagaagcgtaaggtaaaatctaaatctacggaaaaagctaaagaaggccaggat 1454
Query: 481 aaggaatctcaggcagcagcaacttctccaaagaagaagaaaaaggccagtaaaaagaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 aaggaatctcaggcagcagcaacttctccaaagaagaagaaaaaggccagtaaaaagaag 1514
Query: 541 gaaaagaaaaaagatgactacaatgaggacgagttttccaaagctttggcagaaatggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1515 gaaaagaaaaaagatgactacaatgaggacgagttttccaaagctttggcagaaatggtt 1574
Query: 601 aatcaagtggttaacacgtcattgatggataatgcacaaacagcccaagtgcccactact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1575 aatcaagtggttaacacgtcattgatggataatgcacaaacagcccaagtgcccactact 1634
Query: 661 gaagagacaaaattagaaaaaacatccaaaaagaagaacaagtcgaagtcgaaaagtaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1635 gaagagacaaaattagaaaaaacatccaaaaagaagaacaagtcgaagtcgaaaagtaga 1694
Query: 721 agtggtgatgattacgctccaaaaggtaaaagtaaggtgcctaaagatacaaaaaagaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1695 agtggtgatgattacgctccaaaaggtaaaagtaaggtgcctaaagatacaaaaaagaaa 1754
Query: 781 ggtacttcgtcttcaaagattaatcaagaaatcaaggcaatacctcttgatccagaactt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1755 ggtacttcgtcttcaaagattaatcaagaaatcaaggcaatacctcttgatccagaactt 1814
Query: 841 gtgaaagaaagtgcatcacaggcagctgtagctccagatgccaaggacacaacggatgtg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1815 gtgaaagaaagtgcatcacaggcagctgtagctccagatgccaaggacacaacggatgtg 1874
Query: 901 tcccatttaagtactagtgatggatttgacctacatcaaatcatgcaa 948
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1875 tcccatttaagtactagtgatggatttgacctacatcaaatcatgcaa 1922
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,060
Number of Sequences: 1807
Number of extensions: 11060
Number of successful extensions: 119
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)